shell bypass 403
from __future__ import division, absolute_import, print_function
import os
import re
import sys
import types
import shlex
import time
from copy import copy
from distutils import ccompiler
from distutils.ccompiler import *
from distutils.errors import DistutilsExecError, DistutilsModuleError, \
DistutilsPlatformError, CompileError
from distutils.sysconfig import customize_compiler
from distutils.version import LooseVersion
from numpy.distutils import log
from numpy.distutils.compat import get_exception
from numpy.distutils.exec_command import exec_command
from numpy.distutils.misc_util import cyg2win32, is_sequence, mingw32, \
quote_args, get_num_build_jobs, \
_commandline_dep_string
# globals for parallel build management
try:
import threading
except ImportError:
import dummy_threading as threading
_job_semaphore = None
_global_lock = threading.Lock()
_processing_files = set()
def _needs_build(obj, cc_args, extra_postargs, pp_opts):
"""
Check if an objects needs to be rebuild based on its dependencies
Parameters
----------
obj : str
object file
Returns
-------
bool
"""
# defined in unixcompiler.py
dep_file = obj + '.d'
if not os.path.exists(dep_file):
return True
# dep_file is a makefile containing 'object: dependencies'
# formated like posix shell (spaces escaped, \ line continuations)
# the last line contains the compiler commandline arguments as some
# projects may compile an extension multiple times with different
# arguments
with open(dep_file, "r") as f:
lines = f.readlines()
cmdline =_commandline_dep_string(cc_args, extra_postargs, pp_opts)
last_cmdline = lines[-1]
if last_cmdline != cmdline:
return True
contents = ''.join(lines[:-1])
deps = [x for x in shlex.split(contents, posix=True)
if x != "\n" and not x.endswith(":")]
try:
t_obj = os.stat(obj).st_mtime
# check if any of the dependencies is newer than the object
# the dependencies includes the source used to create the object
for f in deps:
if os.stat(f).st_mtime > t_obj:
return True
except OSError:
# no object counts as newer (shouldn't happen if dep_file exists)
return True
return False
def replace_method(klass, method_name, func):
if sys.version_info[0] < 3:
m = types.MethodType(func, None, klass)
else:
# Py3k does not have unbound method anymore, MethodType does not work
m = lambda self, *args, **kw: func(self, *args, **kw)
setattr(klass, method_name, m)
######################################################################
## Method that subclasses may redefine. But don't call this method,
## it i private to CCompiler class and may return unexpected
## results if used elsewhere. So, you have been warned..
def CCompiler_find_executables(self):
"""
Does nothing here, but is called by the get_version method and can be
overridden by subclasses. In particular it is redefined in the `FCompiler`
class where more documentation can be found.
"""
pass
replace_method(CCompiler, 'find_executables', CCompiler_find_executables)
# Using customized CCompiler.spawn.
def CCompiler_spawn(self, cmd, display=None):
"""
Execute a command in a sub-process.
Parameters
----------
cmd : str
The command to execute.
display : str or sequence of str, optional
The text to add to the log file kept by `numpy.distutils`.
If not given, `display` is equal to `cmd`.
Returns
-------
None
Raises
------
DistutilsExecError
If the command failed, i.e. the exit status was not 0.
"""
if display is None:
display = cmd
if is_sequence(display):
display = ' '.join(list(display))
log.info(display)
s, o = exec_command(cmd)
if s:
if is_sequence(cmd):
cmd = ' '.join(list(cmd))
try:
print(o)
except UnicodeError:
# When installing through pip, `o` can contain non-ascii chars
pass
if re.search('Too many open files', o):
msg = '\nTry rerunning setup command until build succeeds.'
else:
msg = ''
raise DistutilsExecError('Command "%s" failed with exit status %d%s' % (cmd, s, msg))
replace_method(CCompiler, 'spawn', CCompiler_spawn)
def CCompiler_object_filenames(self, source_filenames, strip_dir=0, output_dir=''):
"""
Return the name of the object files for the given source files.
Parameters
----------
source_filenames : list of str
The list of paths to source files. Paths can be either relative or
absolute, this is handled transparently.
strip_dir : bool, optional
Whether to strip the directory from the returned paths. If True,
the file name prepended by `output_dir` is returned. Default is False.
output_dir : str, optional
If given, this path is prepended to the returned paths to the
object files.
Returns
-------
obj_names : list of str
The list of paths to the object files corresponding to the source
files in `source_filenames`.
"""
if output_dir is None:
output_dir = ''
obj_names = []
for src_name in source_filenames:
base, ext = os.path.splitext(os.path.normpath(src_name))
base = os.path.splitdrive(base)[1] # Chop off the drive
base = base[os.path.isabs(base):] # If abs, chop off leading /
if base.startswith('..'):
# Resolve starting relative path components, middle ones
# (if any) have been handled by os.path.normpath above.
i = base.rfind('..')+2
d = base[:i]
d = os.path.basename(os.path.abspath(d))
base = d + base[i:]
if ext not in self.src_extensions:
raise UnknownFileError("unknown file type '%s' (from '%s')" % (ext, src_name))
if strip_dir:
base = os.path.basename(base)
obj_name = os.path.join(output_dir, base + self.obj_extension)
obj_names.append(obj_name)
return obj_names
replace_method(CCompiler, 'object_filenames', CCompiler_object_filenames)
def CCompiler_compile(self, sources, output_dir=None, macros=None,
include_dirs=None, debug=0, extra_preargs=None,
extra_postargs=None, depends=None):
"""
Compile one or more source files.
Please refer to the Python distutils API reference for more details.
Parameters
----------
sources : list of str
A list of filenames
output_dir : str, optional
Path to the output directory.
macros : list of tuples
A list of macro definitions.
include_dirs : list of str, optional
The directories to add to the default include file search path for
this compilation only.
debug : bool, optional
Whether or not to output debug symbols in or alongside the object
file(s).
extra_preargs, extra_postargs : ?
Extra pre- and post-arguments.
depends : list of str, optional
A list of file names that all targets depend on.
Returns
-------
objects : list of str
A list of object file names, one per source file `sources`.
Raises
------
CompileError
If compilation fails.
"""
# This method is effective only with Python >=2.3 distutils.
# Any changes here should be applied also to fcompiler.compile
# method to support pre Python 2.3 distutils.
global _job_semaphore
jobs = get_num_build_jobs()
# setup semaphore to not exceed number of compile jobs when parallelized at
# extension level (python >= 3.5)
with _global_lock:
if _job_semaphore is None:
_job_semaphore = threading.Semaphore(jobs)
if not sources:
return []
# FIXME:RELATIVE_IMPORT
if sys.version_info[0] < 3:
from .fcompiler import FCompiler, is_f_file, has_f90_header
else:
from numpy.distutils.fcompiler import (FCompiler, is_f_file,
has_f90_header)
if isinstance(self, FCompiler):
display = []
for fc in ['f77', 'f90', 'fix']:
fcomp = getattr(self, 'compiler_'+fc)
if fcomp is None:
continue
display.append("Fortran %s compiler: %s" % (fc, ' '.join(fcomp)))
display = '\n'.join(display)
else:
ccomp = self.compiler_so
display = "C compiler: %s\n" % (' '.join(ccomp),)
log.info(display)
macros, objects, extra_postargs, pp_opts, build = \
self._setup_compile(output_dir, macros, include_dirs, sources,
depends, extra_postargs)
cc_args = self._get_cc_args(pp_opts, debug, extra_preargs)
display = "compile options: '%s'" % (' '.join(cc_args))
if extra_postargs:
display += "\nextra options: '%s'" % (' '.join(extra_postargs))
log.info(display)
def single_compile(args):
obj, (src, ext) = args
if not _needs_build(obj, cc_args, extra_postargs, pp_opts):
return
# check if we are currently already processing the same object
# happens when using the same source in multiple extensions
while True:
# need explicit lock as there is no atomic check and add with GIL
with _global_lock:
# file not being worked on, start working
if obj not in _processing_files:
_processing_files.add(obj)
break
# wait for the processing to end
time.sleep(0.1)
try:
# retrieve slot from our #job semaphore and build
with _job_semaphore:
self._compile(obj, src, ext, cc_args, extra_postargs, pp_opts)
finally:
# register being done processing
with _global_lock:
_processing_files.remove(obj)
if isinstance(self, FCompiler):
objects_to_build = list(build.keys())
f77_objects, other_objects = [], []
for obj in objects:
if obj in objects_to_build:
src, ext = build[obj]
if self.compiler_type=='absoft':
obj = cyg2win32(obj)
src = cyg2win32(src)
if is_f_file(src) and not has_f90_header(src):
f77_objects.append((obj, (src, ext)))
else:
other_objects.append((obj, (src, ext)))
# f77 objects can be built in parallel
build_items = f77_objects
# build f90 modules serial, module files are generated during
# compilation and may be used by files later in the list so the
# ordering is important
for o in other_objects:
single_compile(o)
else:
build_items = build.items()
if len(build) > 1 and jobs > 1:
# build parallel
import multiprocessing.pool
pool = multiprocessing.pool.ThreadPool(jobs)
pool.map(single_compile, build_items)
pool.close()
else:
# build serial
for o in build_items:
single_compile(o)
# Return *all* object filenames, not just the ones we just built.
return objects
replace_method(CCompiler, 'compile', CCompiler_compile)
def CCompiler_customize_cmd(self, cmd, ignore=()):
"""
Customize compiler using distutils command.
Parameters
----------
cmd : class instance
An instance inheriting from `distutils.cmd.Command`.
ignore : sequence of str, optional
List of `CCompiler` commands (without ``'set_'``) that should not be
altered. Strings that are checked for are:
``('include_dirs', 'define', 'undef', 'libraries', 'library_dirs',
'rpath', 'link_objects')``.
Returns
-------
None
"""
log.info('customize %s using %s' % (self.__class__.__name__,
cmd.__class__.__name__))
def allow(attr):
return getattr(cmd, attr, None) is not None and attr not in ignore
if allow('include_dirs'):
self.set_include_dirs(cmd.include_dirs)
if allow('define'):
for (name, value) in cmd.define:
self.define_macro(name, value)
if allow('undef'):
for macro in cmd.undef:
self.undefine_macro(macro)
if allow('libraries'):
self.set_libraries(self.libraries + cmd.libraries)
if allow('library_dirs'):
self.set_library_dirs(self.library_dirs + cmd.library_dirs)
if allow('rpath'):
self.set_runtime_library_dirs(cmd.rpath)
if allow('link_objects'):
self.set_link_objects(cmd.link_objects)
replace_method(CCompiler, 'customize_cmd', CCompiler_customize_cmd)
def _compiler_to_string(compiler):
props = []
mx = 0
keys = list(compiler.executables.keys())
for key in ['version', 'libraries', 'library_dirs',
'object_switch', 'compile_switch',
'include_dirs', 'define', 'undef', 'rpath', 'link_objects']:
if key not in keys:
keys.append(key)
for key in keys:
if hasattr(compiler, key):
v = getattr(compiler, key)
mx = max(mx, len(key))
props.append((key, repr(v)))
lines = []
format = '%-' + repr(mx+1) + 's = %s'
for prop in props:
lines.append(format % prop)
return '\n'.join(lines)
def CCompiler_show_customization(self):
"""
Print the compiler customizations to stdout.
Parameters
----------
None
Returns
-------
None
Notes
-----
Printing is only done if the distutils log threshold is < 2.
"""
if 0:
for attrname in ['include_dirs', 'define', 'undef',
'libraries', 'library_dirs',
'rpath', 'link_objects']:
attr = getattr(self, attrname, None)
if not attr:
continue
log.info("compiler '%s' is set to %s" % (attrname, attr))
try:
self.get_version()
except:
pass
if log._global_log.threshold<2:
print('*'*80)
print(self.__class__)
print(_compiler_to_string(self))
print('*'*80)
replace_method(CCompiler, 'show_customization', CCompiler_show_customization)
def CCompiler_customize(self, dist, need_cxx=0):
"""
Do any platform-specific customization of a compiler instance.
This method calls `distutils.sysconfig.customize_compiler` for
platform-specific customization, as well as optionally remove a flag
to suppress spurious warnings in case C++ code is being compiled.
Parameters
----------
dist : object
This parameter is not used for anything.
need_cxx : bool, optional
Whether or not C++ has to be compiled. If so (True), the
``"-Wstrict-prototypes"`` option is removed to prevent spurious
warnings. Default is False.
Returns
-------
None
Notes
-----
All the default options used by distutils can be extracted with::
from distutils import sysconfig
sysconfig.get_config_vars('CC', 'CXX', 'OPT', 'BASECFLAGS',
'CCSHARED', 'LDSHARED', 'SO')
"""
# See FCompiler.customize for suggested usage.
log.info('customize %s' % (self.__class__.__name__))
customize_compiler(self)
if need_cxx:
# In general, distutils uses -Wstrict-prototypes, but this option is
# not valid for C++ code, only for C. Remove it if it's there to
# avoid a spurious warning on every compilation.
try:
self.compiler_so.remove('-Wstrict-prototypes')
except (AttributeError, ValueError):
pass
if hasattr(self, 'compiler') and 'cc' in self.compiler[0]:
if not self.compiler_cxx:
if self.compiler[0].startswith('gcc'):
a, b = 'gcc', 'g++'
else:
a, b = 'cc', 'c++'
self.compiler_cxx = [self.compiler[0].replace(a, b)]\
+ self.compiler[1:]
else:
if hasattr(self, 'compiler'):
log.warn("#### %s #######" % (self.compiler,))
if not hasattr(self, 'compiler_cxx'):
log.warn('Missing compiler_cxx fix for ' + self.__class__.__name__)
# check if compiler supports gcc style automatic dependencies
# run on every extension so skip for known good compilers
if hasattr(self, 'compiler') and ('gcc' in self.compiler[0] or
'g++' in self.compiler[0] or
'clang' in self.compiler[0]):
self._auto_depends = True
elif os.name == 'posix':
import tempfile
import shutil
tmpdir = tempfile.mkdtemp()
try:
fn = os.path.join(tmpdir, "file.c")
with open(fn, "w") as f:
f.write("int a;\n")
self.compile([fn], output_dir=tmpdir,
extra_preargs=['-MMD', '-MF', fn + '.d'])
self._auto_depends = True
except CompileError:
self._auto_depends = False
finally:
shutil.rmtree(tmpdir)
return
replace_method(CCompiler, 'customize', CCompiler_customize)
def simple_version_match(pat=r'[-.\d]+', ignore='', start=''):
"""
Simple matching of version numbers, for use in CCompiler and FCompiler.
Parameters
----------
pat : str, optional
A regular expression matching version numbers.
Default is ``r'[-.\\d]+'``.
ignore : str, optional
A regular expression matching patterns to skip.
Default is ``''``, in which case nothing is skipped.
start : str, optional
A regular expression matching the start of where to start looking
for version numbers.
Default is ``''``, in which case searching is started at the
beginning of the version string given to `matcher`.
Returns
-------
matcher : callable
A function that is appropriate to use as the ``.version_match``
attribute of a `CCompiler` class. `matcher` takes a single parameter,
a version string.
"""
def matcher(self, version_string):
# version string may appear in the second line, so getting rid
# of new lines:
version_string = version_string.replace('\n', ' ')
pos = 0
if start:
m = re.match(start, version_string)
if not m:
return None
pos = m.end()
while True:
m = re.search(pat, version_string[pos:])
if not m:
return None
if ignore and re.match(ignore, m.group(0)):
pos = m.end()
continue
break
return m.group(0)
return matcher
def CCompiler_get_version(self, force=False, ok_status=[0]):
"""
Return compiler version, or None if compiler is not available.
Parameters
----------
force : bool, optional
If True, force a new determination of the version, even if the
compiler already has a version attribute. Default is False.
ok_status : list of int, optional
The list of status values returned by the version look-up process
for which a version string is returned. If the status value is not
in `ok_status`, None is returned. Default is ``[0]``.
Returns
-------
version : str or None
Version string, in the format of `distutils.version.LooseVersion`.
"""
if not force and hasattr(self, 'version'):
return self.version
self.find_executables()
try:
version_cmd = self.version_cmd
except AttributeError:
return None
if not version_cmd or not version_cmd[0]:
return None
try:
matcher = self.version_match
except AttributeError:
try:
pat = self.version_pattern
except AttributeError:
return None
def matcher(version_string):
m = re.match(pat, version_string)
if not m:
return None
version = m.group('version')
return version
status, output = exec_command(version_cmd, use_tee=0)
version = None
if status in ok_status:
version = matcher(output)
if version:
version = LooseVersion(version)
self.version = version
return version
replace_method(CCompiler, 'get_version', CCompiler_get_version)
def CCompiler_cxx_compiler(self):
"""
Return the C++ compiler.
Parameters
----------
None
Returns
-------
cxx : class instance
The C++ compiler, as a `CCompiler` instance.
"""
if self.compiler_type in ('msvc', 'intelw', 'intelemw'):
return self
cxx = copy(self)
cxx.compiler_so = [cxx.compiler_cxx[0]] + cxx.compiler_so[1:]
if sys.platform.startswith('aix') and 'ld_so_aix' in cxx.linker_so[0]:
# AIX needs the ld_so_aix script included with Python
cxx.linker_so = [cxx.linker_so[0], cxx.compiler_cxx[0]] \
+ cxx.linker_so[2:]
else:
cxx.linker_so = [cxx.compiler_cxx[0]] + cxx.linker_so[1:]
return cxx
replace_method(CCompiler, 'cxx_compiler', CCompiler_cxx_compiler)
compiler_class['intel'] = ('intelccompiler', 'IntelCCompiler',
"Intel C Compiler for 32-bit applications")
compiler_class['intele'] = ('intelccompiler', 'IntelItaniumCCompiler',
"Intel C Itanium Compiler for Itanium-based applications")
compiler_class['intelem'] = ('intelccompiler', 'IntelEM64TCCompiler',
"Intel C Compiler for 64-bit applications")
compiler_class['intelw'] = ('intelccompiler', 'IntelCCompilerW',
"Intel C Compiler for 32-bit applications on Windows")
compiler_class['intelemw'] = ('intelccompiler', 'IntelEM64TCCompilerW',
"Intel C Compiler for 64-bit applications on Windows")
compiler_class['pathcc'] = ('pathccompiler', 'PathScaleCCompiler',
"PathScale Compiler for SiCortex-based applications")
ccompiler._default_compilers += (('linux.*', 'intel'),
('linux.*', 'intele'),
('linux.*', 'intelem'),
('linux.*', 'pathcc'),
('nt', 'intelw'),
('nt', 'intelemw'))
if sys.platform == 'win32':
compiler_class['mingw32'] = ('mingw32ccompiler', 'Mingw32CCompiler',
"Mingw32 port of GNU C Compiler for Win32"\
"(for MSC built Python)")
if mingw32():
# On windows platforms, we want to default to mingw32 (gcc)
# because msvc can't build blitz stuff.
log.info('Setting mingw32 as default compiler for nt.')
ccompiler._default_compilers = (('nt', 'mingw32'),) \
+ ccompiler._default_compilers
_distutils_new_compiler = new_compiler
def new_compiler (plat=None,
compiler=None,
verbose=0,
dry_run=0,
force=0):
# Try first C compilers from numpy.distutils.
if plat is None:
plat = os.name
try:
if compiler is None:
compiler = get_default_compiler(plat)
(module_name, class_name, long_description) = compiler_class[compiler]
except KeyError:
msg = "don't know how to compile C/C++ code on platform '%s'" % plat
if compiler is not None:
msg = msg + " with '%s' compiler" % compiler
raise DistutilsPlatformError(msg)
module_name = "numpy.distutils." + module_name
try:
__import__ (module_name)
except ImportError:
msg = str(get_exception())
log.info('%s in numpy.distutils; trying from distutils',
str(msg))
module_name = module_name[6:]
try:
__import__(module_name)
except ImportError:
msg = str(get_exception())
raise DistutilsModuleError("can't compile C/C++ code: unable to load module '%s'" % \
module_name)
try:
module = sys.modules[module_name]
klass = vars(module)[class_name]
except KeyError:
raise DistutilsModuleError(("can't compile C/C++ code: unable to find class '%s' " +
"in module '%s'") % (class_name, module_name))
compiler = klass(None, dry_run, force)
log.debug('new_compiler returns %s' % (klass))
return compiler
ccompiler.new_compiler = new_compiler
_distutils_gen_lib_options = gen_lib_options
def gen_lib_options(compiler, library_dirs, runtime_library_dirs, libraries):
library_dirs = quote_args(library_dirs)
runtime_library_dirs = quote_args(runtime_library_dirs)
r = _distutils_gen_lib_options(compiler, library_dirs,
runtime_library_dirs, libraries)
lib_opts = []
for i in r:
if is_sequence(i):
lib_opts.extend(list(i))
else:
lib_opts.append(i)
return lib_opts
ccompiler.gen_lib_options = gen_lib_options
# Also fix up the various compiler modules, which do
# from distutils.ccompiler import gen_lib_options
# Don't bother with mwerks, as we don't support Classic Mac.
for _cc in ['msvc9', 'msvc', '_msvc', 'bcpp', 'cygwinc', 'emxc', 'unixc']:
_m = sys.modules.get('distutils.' + _cc + 'compiler')
if _m is not None:
setattr(_m, 'gen_lib_options', gen_lib_options)
_distutils_gen_preprocess_options = gen_preprocess_options
def gen_preprocess_options (macros, include_dirs):
include_dirs = quote_args(include_dirs)
return _distutils_gen_preprocess_options(macros, include_dirs)
ccompiler.gen_preprocess_options = gen_preprocess_options
##Fix distutils.util.split_quoted:
# NOTE: I removed this fix in revision 4481 (see ticket #619), but it appears
# that removing this fix causes f2py problems on Windows XP (see ticket #723).
# Specifically, on WinXP when gfortran is installed in a directory path, which
# contains spaces, then f2py is unable to find it.
import string
_wordchars_re = re.compile(r'[^\\\'\"%s ]*' % string.whitespace)
_squote_re = re.compile(r"'(?:[^'\\]|\\.)*'")
_dquote_re = re.compile(r'"(?:[^"\\]|\\.)*"')
_has_white_re = re.compile(r'\s')
def split_quoted(s):
s = s.strip()
words = []
pos = 0
while s:
m = _wordchars_re.match(s, pos)
end = m.end()
if end == len(s):
words.append(s[:end])
break
if s[end] in string.whitespace: # unescaped, unquoted whitespace: now
words.append(s[:end]) # we definitely have a word delimiter
s = s[end:].lstrip()
pos = 0
elif s[end] == '\\': # preserve whatever is being escaped;
# will become part of the current word
s = s[:end] + s[end+1:]
pos = end+1
else:
if s[end] == "'": # slurp singly-quoted string
m = _squote_re.match(s, end)
elif s[end] == '"': # slurp doubly-quoted string
m = _dquote_re.match(s, end)
else:
raise RuntimeError("this can't happen (bad char '%c')" % s[end])
if m is None:
raise ValueError("bad string (mismatched %s quotes?)" % s[end])
(beg, end) = m.span()
if _has_white_re.search(s[beg+1:end-1]):
s = s[:beg] + s[beg+1:end-1] + s[end:]
pos = m.end() - 2
else:
# Keeping quotes when a quoted word does not contain
# white-space. XXX: send a patch to distutils
pos = m.end()
if pos >= len(s):
words.append(s)
break
return words
ccompiler.split_quoted = split_quoted
##Fix distutils.util.split_quoted: